Tag: Code
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Covariances Simultaneous Component Analysis
Covariances Simultaneous Component Analysis (COVSCA). The toolbox accompanying the paper https://doi.org/10.1002/cem.2707
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Dynamic elementary mode regression
Dynamic elementary mode regression (dynEMR) discriminant analysis for non-steady state flux data.
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HC4N Toolbox
This R-toolbox contains the HC4N algorithm and supplementary functions explained in the publication Towards a Hierarchical Strategy to Explore Multi-Scale IP/MS Data for Protein Complexes
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Invalidation by Smooth PCA
Matlab functions needed to carry out invalidation of ODE based biochemical kinetic models using Smooth Principal Components Analysis.
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PCA of binary genomics data
Scripts to reproduce the data in Principal component analysis of binary genomics data
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GSCA of binary and quantitative data
Software to accompany Generalized Simultaneous Component Analysis of Binary and Quantitative data
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Logistic PCA toolbox
Software to accompany Logistic principal component analysis via non-convex singular value thresholding
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Simulated Annealing Toolbox For Optimization
You can download the source code for SATFO here
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PetriNet Simulation
Here you can find the c code for the petrinet simulation